Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907369.1_cds_XP_016457502.1_51221
CDS Infomation

[gene=LOC107781328] [db_xref=GeneID:107781328] [protein=pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like] [protein_id=XP_016457502.1] [location=30155..31729] [gbkey=CDS]
Sequence

ATGAAACAAGCCCGTTCTCTCTTCTTCTCCAAAACCAAAACCAAAACCCTATTCGCTTGT
CTCCATTTCCTCCGCTTCTTGTGTTGTTCAGAAGTGAATCAACGGCCGCCGTCACTGCCG
CAATTGGAACCCTCAAACGACGCCGACTTGATTTCCCAAGTGCTCGTCCAACACCACAAT
CCATTTCACGCCATGGAATCTTCTCTTCAGCTCCACGGAATTTCTCTCACCCCTTTCCTT
GTCCATCAAACCCTCCTCCGCCTAAAAAACTCTTCCAAAATTGCCCTCTCCTTTTTCCAG
TATTCCCAGTCACATCCCAGTTACTCCCTCGACTCCAACACTTTGAATCTCCTCATCGAC
ATTCTATGCAAAGTCCACCAGTTCGATGTTGCGTGGCAGATTATTATCCTAATGGAACAG
AAATGCATTAAACCCAACTTCACTACTTTCTATTTGTTGATCCGTAGGCTTATTTCTGCT
GGTTTGACCCGTCAAGCCATTCGGGCATTCAGTGAAATCCATATATTTATAGATGAAGAA
AGTGAAGAGCAAGTGTGGAAGTCGTATTTTTGTTATCTTCTTGATACTCTTTGTAAATAT
GGATATGTTAAAGTGGCTACTCAAGTGTTCAATAAGGAGAAGTGGAGATTGGAGCTCAAT
TGTAAGATTTATACCATTCTCATATATGGTTGGTGTAAGGTGAAGAATATAGATATGGCT
AGGAGGTTTCTAGAAGAGATGTTGGAGAAGGGAATTCATCCGAACGTGGTGAGTTACAAT
GTGTTGTTGAATGGGATTTGCAGGAGAGCGAGTTTGCATCCTGAGGGAAGATTTGAGCAG
GTAATTAGGGAAGCAGAGAAGGTGTTTGATGAAATGACTGAACGAGGTGTGGAACCGGAT
GTGACCAGCTATTCTGTACTCCTTCATGTCTATAGCCGGGCTCATAAGCCGGAGTTATTA
CTTGATAAATTAAGGATTATGAGACGCAAAGGGATATGCCCGAATATTGTGACATATAGC
TCAGTCATCAAGTGCCTCTGCTCTTGTGGTAGGATTGAAGATGCTGAGCTTTTACTCGAG
CAAATGGTTTCTAATGGAGTGACTCCCACATCCGCAACTTACAATTGCTTCTTTAAAGAG
TACAAAGGGAGGAAGGATGTCGATGGTGCATTGAGGTTATATGAGAAAATGAAGCAGGGT
TCCCTCTGCCCACCTAACGTTAGTACGTATAATATATTGTTAGGGATGTTATTGAAATTG
GGCCGAATAGGGCTGGCCAGAGATATTTGGGAAGATATGAAGGCGTCTGGAGCAGGGCCT
GATTTGGATTCATATACATTGTTGGTTCATGGATTTTGCGAGAAACAAAAATGGAAAACG
GCCTGCGAATTCTTTATGGAAATGATAGAAAAAGGATTTCTGCCGCACAAGGTGACCTTT
GAGACACTTTATAGAGGCTTAATACAATCCAATATGTTGAGAACCTGGAGAAGTTTAAAG
AAAAGGCTTGATGAGGAAACAATAACTTTTGGTTCAGAATTCGAAAATTATCACCTCAAG
CCTTATAGAAGGTGA

Peptide Sequence

PEP ID

XP_016457502.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like [Nicotiana tabacum]
Sequence

MKQARSLFFSKTKTKTLFACLHFLRFLCCSEVNQRPPSLPQLEPSNDADLISQVLVQHHN
PFHAMESSLQLHGISLTPFLVHQTLLRLKNSSKIALSFFQYSQSHPSYSLDSNTLNLLID
ILCKVHQFDVAWQIIILMEQKCIKPNFTTFYLLIRRLISAGLTRQAIRAFSEIHIFIDEE
SEEQVWKSYFCYLLDTLCKYGYVKVATQVFNKEKWRLELNCKIYTILIYGWCKVKNIDMA
RRFLEEMLEKGIHPNVVSYNVLLNGICRRASLHPEGRFEQVIREAEKVFDEMTERGVEPD
VTSYSVLLHVYSRAHKPELLLDKLRIMRRKGICPNIVTYSSVIKCLCSCGRIEDAELLLE
QMVSNGVTPTSATYNCFFKEYKGRKDVDGALRLYEKMKQGSLCPPNVSTYNILLGMLLKL
GRIGLARDIWEDMKASGAGPDLDSYTLLVHGFCEKQKWKTACEFFMEMIEKGFLPHKVTF
ETLYRGLIQSNMLRTWRSLKKRLDEETITFGSEFENYHLKPYRR

Transcript Sequence

Gene sequence data has not been registered.